Database Annotation in Molecular Biology: Principles and Practice

Database Annotation in Molecular Biology: Principles and Practice PDF

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Bioinformatik

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Arthur Mallay Lesk ist ein Proteinforscher und Professor für Biochemie und Molekularbiologie an der Pennsylvania State University in University Park. Lesk erhielt 1961 einen Bachelor-Abschluss, magna cum laude, von der Harvard University. Er promovierte 1966 an der Princeton University. Außerdem erhielt er 1999 einen Master-Abschluss von der University of Cambridge im Vereinigten Königreich. Lesk hat bedeutende Beiträge geleistet zum Studium der Proteinevolution. Er und Cyrus Chothia, die am Labor für Molekularbiologie des Medical Research Council (UK) in Cambridge, Großbritannien, arbeiten, entdeckten die Beziehung zwischen Änderungen in der Aminosäuresequenz und Änderungen in der Proteinstruktur, indem sie den Evolutionsmechanismus in Proteinfamilien analysierten Entdeckung hat die quantitative Grundlage für die erfolgreichste und am weitesten verbreitete Methode zur Strukturvorhersage, bekannt als Homologiemodellierung, geliefert.

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Database Annotation in Molecular Biology: Principles and Practice pdf von Arthur Mallay Lesk

Two factors dominate current molecular biology: the amount of raw data is increasing very rapidly and successful applications in biomedical research require carefully curated and annotated databases. The quality of the experimental data -- especially nucleic acid sequences -- is satisfactory; however, annotations depend on features inferred from the data rather than measured directly, for instance the identification of genes in genome sequences. It is essential that these inferences are as accurate as possible and this requires human intervention.
With the recognition of the importance of accurate database annotation and the requirement for individuals with particular constellations of skills to carry it out, annotators are emerging as specialists within the profession of bioinformatics. This book compiles information about annotation -- its current status, what is required to improve it, what skills must be brought to bear on database curation and hence what is the proper training for annotators.
The book should be essential reading for all people working on biological databases, both biologists and computer scientists. It will also be of interest to all users of such databases, including molecular biologists, geneticists, protein chemists, clinicians and drug developers.

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